sliceOmatic 5.0

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  • sliceOmatic
  • Protocols
  • More Modules
  • More Classes
  • More Tools
sliceOmatic
  Download now
Version:

 5.0 Rev-14
Updated: March 7th 2021
File Size: 71.0 Mb
License: Buy the permanent license
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Requirements: Windows XP/Vista/7/8/10 (32 bits), Windows 7/8/10 (64 bits)
2GB RAM, OpenGL Graphics Card (preferably with a NVidia chipset)
Protocols: This script contain 2 set of protocols scripts
  • Alberta Protocol
    This protocol is used to simplify the segmentation of one CT slices at L3.
  • Baylor Thigh Protocol
    This protocol is used to simplify the segmentation of a 10 cm section of the thigh using MR images.
  Download now
Version:

 5.0 Rev-14
Updated: March 7th 2021
File Size: 2.4 Mb
License: These protocols do not need any special license, just the basic sliceOmatic license.
Requirement: This revision of the protocols is compatible with sliceOmatic 5.0 Rev-14.
Additional Modes: This script contain 9 additional modes
  • Mode: ABACS
    By Voronoi Health Analytics
    This module is used to automatically compute the segmenation of CT slices at T4 or L3.
  • Mode: 1D DB
    This module actually contain 2 new modes: "Class Selection 1D" and "File Selection 1D": These modes are used to change the 1D database architecture. It is similar to the "DB Class Management 2D" and the "DB File Management 2D" modes but for the 1D database and files.
    Note: At this time, only the Spectroscopy datasets are part of the 1D databse.
  • Mode: MR Spectroscopy
    This mode is used to analyze MR spectroscopy datasets.
  • Mode: 3D DB
    This module actually contain 2 new modes: "Class Selection 3D" and "File Selection 3D". These modes are used to change the 3D database architecture. It is similar to the "DB Class Management 2D" and the "DB File Management 2D" modes but for the 3D database and files.
  • Mode: Histogram Segmentation
    These modes are used to segment the images with the help of the histogram.
  • Mode: TAG Interpolation
    This mode is used to interpolate missing TAG values in a stack of slices.
  • Mode: TAG Read User
    This mode is used to read tag files generated by the users.
  Download now
Version:

 5.0 Rev-14
Updated: March 7th 2021
File Size: 25.8 Mb
License: The ABACS module need a special license.
Requirement: The ABACS module only work on Windows 64 bits.
This revision of the module is compatible with sliceOmatic 5.0 Rev-14.
Additional classes: This script contain 6 additional clasess
  • "Border": This class is used to add borders around the frames.
  • "Clone": This class duplicate a branch of the database tree.
  • "Gradient Amplification": This class create artificial gradients around target GLI values to help gradient based segmentation techniques (like "Morpho" and "Snake").
  • "Rotating Cut": This class create new frames in a plane defined by 3 points and rotating around the axis created by 2 of these points.
  • "RR2D": This "Rigid Registration 2D" class enable you to register frames or series together.
  • "RR3D": This "Rigid Registration 3D" class enable you to register series together.
  Download now
Version:

 5.0 Rev-14
Updated: March 7th 2021
File Size: 2.5 Mb
License: These Class modules do not need any special license, just the basic sliceOmatic license.
Requirement: This revision of the classes is compatible with sliceOmatic 5.0 Rev-14.
Additional tools: This script contain 10 additional tools
  • "2D DICOM Info": This tool enable you to save the content of DICOM tags in the Excel result file.
  • "2D Gradient": This tool limit the gradient computation of the images to a threshold range.
  • "2D Pixel Interpolation": This tool enable you to "smooth" the images at higher magnifications.
  • "2D TAG DICOM Save": This tool enable you to save the tag files in DICOM format.
  • "3D BurnIn": This tool is used to add the geometry displacement info into the actual node position.
  • "3D Cleanup": This tool is used to cleanup the noise in 3D geometries.
  • "3D Doctor": This tool is used to check a geometry file fior errors.
  • "3D Geometry Relaxation": This tool is used to create better 3D geometries with thresholding.
  • "3D Geometry Selection": This tool is used to select/de-select 3D geometries.
  • "3D Sphere Fit": This tool is used to fit a sphere to a portion of an existing geometry using least squarre technique.
  Download now
Version:

 5.0 Rev-14
Updated: March 7th 2021
File Size: 2.5 Mb
License: These Tool modules do not need any special license, just the basic sliceOmatic license.
Requirement: This revision of the tools is compatible with sliceOmatic 5.0 Rev-14.
Related Downloads
  • SliceOmatic ReadMe File
  • SliceOmatic Tutorial: Segmenting the images (ZIP & PDF; 3.2MB)

    • License Tools and Manual

    - License Installation Manual (95 Kb)
    - TomoVision_License program (265 Kb)
    HASP Tools and Drivers

    - The drivers for the HASP dongles are included in the sliceOmatic's download. But if you need it, you can also get a copy here.
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